About

Bioinformatics researcher with expertise in applying machine learning to complex biological challenges. Holds an MS in Bioinformatics from Johns Hopkins University with specialization in machine learning, computational and structural biology, and drug design. Published researcher at top-tier machine learning conferences, with hands-on experience spanning therapeutic antibody design to protein expression analysis in cancer research. Combines deep technical expertise in machine learning, computational biology, and data science with proven science communication skills, enabling effective cross-disciplinary collaboration and translation of complex research into practical applications.

Machine LearningDrug DiscoveryBioinformatics

Education

Johns Hopkins University | 4.0 GPA

MS, Bioinformatics

Research: “Bridging Quantum and Classical Computing in Drug Design

Honors: Patrick Cummings Research Award for exceptional research in the field of biotechnology

Key Coursework:

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Epigenetics, Gene Organization & Expression
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Algorithms for Bioinformatics
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Introduction to Bioinformatics
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Algorithms for Structural Bioinformatics
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Advanced Practical Computer Concepts for Bioinformatics
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Applied Machine Learning
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Advanced Applied Machine Learning
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Independent Research in Biotechnology
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Computational Drug Discovery and Development

Middlebury College | 3.91 GPA

BA, Religion, Philosophy, and Political Science

Honors: summa cum laude, Theodore S. Woolsey Prize (department award), Phi Beta Kappa Honor Society, thesis with highest honors

Technical Skills

Machine Learning

PyTorchscikit-learnPyTorch GeometricMLFlowGraph Neural NetworksPipelines

Programming

PythonHTML/CSSJavaScript (Beginner)R (Beginner)NumPySciPyPandas

Bio & Cheminformatics

RDKitDeepChemRFdiffusionPyMolChimeraXDocking

Data & Operations

SQLPDBGitDockerUnixREST APIsGPU

Data Visualization

MatplotlibSeabornPlotly3Dmol.js

Quantum Computing

PennylaneQiskit

Projects

Bridging Quantum and Classical Computing in Drug Design: Architecture Principles for Improved Molecule Generation

Published at ICML 2025 - Generative Biology Workshop

Developed a hybrid quantum-classical machine learning architecture for drug discovery that achieved a 2.27-fold improvement in candidate quality while using 60% fewer parameters than classical baselines

De novo Antibody Generation with RFdiffusion

Developed a complete computational antibody design pipeline using diffusion models to generate novel therapeutic antibodies from scratch, created an accessible Google Colab notebook for public use, and authored an educational tutorial demonstrating the end-to-end process from target selection to structural validation

Protein Expression Analysis in Esophageal Cancer

Built a full-stack tool to analyze protein expression patterns in esophageal cancer, integrating SQL databases, Python analysis, and interactive visualizations to identify potential therapeutic targets

Algorithmic Approaches to mRNA Pseudoknot Prediction

Evaluated computational approaches for RNA structure prediction, achieving 11% faster prediction of pseudoknot motifs through combination of machine learning algorithms

Algorithmic Foundations of Quantum Machine Learning

Authored a comprehensive theoretical analysis examining the mathematical differences between classical neural networks and parameterized quantum circuits, focusing on how quantum entanglement enables novel representational capacities and correlation structures beyond classical machine learning paradigms

Experience

Teaching Assistant in Advanced Applied Machine Learning at Johns Hopkins University

August 2025 - Present

Support graduate-level instruction in advanced machine learning techniques and applications

Assist students with complex ML implementations and research methodologies

Communications Lead at Glacier National Park Conservancy

July 2022 - Present

Develop and execute strategy to help scientists communicate their research to the public

Automate processes to scale communications while increasing personalization and relevance

Visual Information Specialist at Glacier National Park

April 2020 - June 2022

Produce and host Headwaters podcast, which hit #1 in the Nature category on Apple Podcasts

Design education wayside signs to exhibit along park roads

Naturalist Park Ranger at Glacier National Park

May 2017 - April 2020

Delivered more than 200 public educational programs, attended by over 8,500 park visitors

Publications

Bridging Quantum and Classical Computing in Drug Design: Architecture Principles for Improved Molecule Generation

July 2025

ICML 2025 - Generative Biology Workshop

Accepted

A Conversation on Fern Taxonomy with Susan Fawcett

June 2022

Kelseya: Newsletter for the Montana Native Plant Society

A discussion with Susan Fawcett, a PhD Research Botanist at the University and Jepson Herbaria at UC Berkeley, specializing in fern evolution, on her work with Thelypteridaceae and fern taxonomy

What Does the Future Hold for Glacier's Alpine Plants?

December 2021

Kelseya: Newsletter for the Montana Native Plant Society

In the lead article for the Winter 2021 edition of Kelseya, I examine new plant morphology data to hypothesize about the future of this ecosystem

Conference Presentations

Bridging Quantum and Classical Computing in Drug Design: Architecture Principles for Improved Molecule Generation

July 2025

ICML 2025 - Generative Biology Workshop | Vancouver, Canada

Presentation on hybrid quantum-classical machine learning architectures for drug discovery

Custom Dynamic Content with Data API Integration

February 2025

Public Lands Alliance Conference | Las Vegas, NV

Getting science to bigger audiences using cron, REST APIs, public resources to create a compelling, automated newsletter

Integrating RENXT with Automated Email Marketing

June 2024

bbdevdays

Demonstrating a custom JS Chrome extension to give fundraisers control over automated email constituents receive through an email platform API

Telling the Whitebark Pine Story: A Media Perspective

September 2022

Whitebark Pine Science and Management Conference | Dillon, MT

Panelist at a session on using the media to tell the story of the whitebark pine and connecting with the public with science

Podcasts: The Best Thing Your Park Isn't Doing

December 2021

National Association for Interpretation Conference | Palm Springs, CA

Telling the story of the Headwaters podcast and how it revolutionized our public outreach efforts and brought national park science and history beyond the park boundaries

Awards

Patrick Cummings Research Award

May 2025

Johns Hopkins University

The Patrick Cummings Research Award recognizes students for exceptional research in the field of biotechnology during their graduate studies. Given for my independent research, "Bridging Quantum and Classical Computing in Drug Design."

Intermountain Group Freeman Tilden Award

January 2022

National Park Service

The Freeman Tilden Awards are the highest interpretation awards presented to a National Park Service individual or team to recognize outstanding contributions to the profession of interpretation. Given for work on season 2 of the Headwaters podcast, covering the plight and recovery efforts for the whitebark pine, an ecologically important tree threatened with extinction.

Volunteer

Board Member, Montana Native Plant Society

2022 - Present

Serve on the Conservation Committee

Book speakers and facilitate conversations for the MNPS Presents speaker series

Lead educational plant walks for the public

Volunteer Judge at County Science Fair

2022 - Present

Give students feedback on their work and the scientific method

Citizen Botanist

2022 - Present

Document rare plant communities in technical mountainous terrain

Conduct post ESA-delisting monitoring for Howellia aquatilis